Publications

​-2023-

Park J, Durham BP, Key RS, Groussman RD, Bartolek Z, Pinedo-Gonzalez P, Hawco NJ, John SG, Carlson MCG, Lindell D, Juranek LW, Ferrón S, Ribalet F, Armbrust EV, Ingalls AE, Bundy RM. Siderophore production and utilization by marine bacteria in the North Pacific Ocean. Limnology & Oceanography 68:1636-1653.
Link to paper

-2022-

Durham BP, Boysen AK, Heal KR, Carlson LT, Boccamazzo R, Deodato CR, Qin W, Cattolico RA, Armbrust EV, Ingalls AE. 2022. Chemotaxonomic patters in the metabolomes of marine microbial plankton. Frontiers in Marine Science 9:864796.
Link to paper

Boysen AK, Durham BP, Kumler W, Key RS, Heal KR, Carlson LT, Groussman RD, Armbrust EV, Ingalls AE. 2022. Glycine betaine uptake and metabolism in marine microbial communities. Environmental Microbiology, 5:2380-2403.
Link to paper

Carlson MCG, Ribalet F, Maidanik I, Durham BP, Hulata Y, Ferrón S, Weissenbach J, Shamir N, Goldin S, Baran N, Cael BB, Karl DM, White AE, Armbrust EV, Lindell D. 2022. Viruses affect picocyanobacterial abundance and biogeography in the North Pacific Ocean. Nature Microbiology 7, 570-580.
doi: 10.1038/s41564-022-01088-x
Link to paper
Nature Microbiology News & Views article

Lambert BS, Groussman RD, Schatz MJ, Coesel SN, Durham BP, Alverson AJ, White AE, Armbrust EV. 2022. The dynamic trophic architecture of open-ocean protist communities revealed through machine learning. Proc Natl Acad Sci USA 119: e2100916119.
doi: 10.1073/pnas.2100916119
Link to paper

-2021-
Groussman RD, Coesel SN, Durham BP, Armbrust EV. 2021. Diel-regulated transcriptional cascades of microbial eukaryotes in the North Pacific Subtropical Gyre. Frontiers in Microbiology 12: 2542.
doi: 10.3389/fmicb.2021.682651
Link to paper

Durham BP. 2021. Deciphering metabolic currencies that support marine microbial networks. mSystems 6: e0076321.
doi: 10.1128/mSystems.00763-21
Link to paper

Boysen AK, Carlson LT, Durham BP, Groussman RD, Aylward FO, Ribalet F, Heal KR, White AE, DeLong EF, Armbrust EV, Ingalls AE. 2021. Particulate metabolites and transcripts reflect diel oscillations of microbial activity in the surface ocean. mSystems 6: e00896-20.
doi: 10.1128/mSystems.00896-20
Link to paper

Heal KR, Durham BP, Boysen AK, Carlson LT, Qin W, Ribalet F, White AE, Bundy RM, Armbrust EV, Ingalls AE. Marine community metabolomes carry fingerprints of phytoplankton community composition. mSystems 6: e01334-20.
​doi: 10.1128/mSystems.01334-20
Link to paper

Coesel SN, Durham BP, Groussman RD, Hu SK, Caron DA, Morales RL, Ribalet F, Armbrust EV. 2021. Diel transcriptional oscillations of light-sensitive regulatory elements in open ocean eukaryotic plankton communities. PNAS 118: e2011038118.
doi: 10.1073/pnas.2011038118
Link to paper
UW news story

2019
Moran MA, Durham BP. 2019. Sulfur metabolites in the pelagic ocean. Nature Reviews Microbiology 17: 665-678.
doi: 10.1038/s41579-019-0250-1
Link to paper

Durham BP, Boysen AK, Carlson LT, Groussman RD, Heal KR, Cain KR, Morales RL, Coesel SN, Morris RM, Ingalls AE, Armbrust EV. 2019. Sulfonate-based networks between eukaryotic phytoplankton and heterotrophic bacteria in the surface ocean. Nature Microbiology 4: 1706-1715.
doi: 10.1038/s41564-019-0507-5
Link to PDF
Behind the paper blog
UW news story
Nature Microbiology News & Views article

Landa M, Burns AS, Durham BP, Esson K, Nowinski BC, Sharma S, Vorobev A, Nielsen T, Kiene RP, Moran MA. 2019. Sulfur metabolites that facilitate oceanic phytoplankton-bacteria carbon flux. ISME Journal 13: 2536-2550.
​doi: 10.1038/s41396-019-0455-3
Link to paper

2018
Becker KW, Collins JR, Durham BP, Groussman RD, White AE, Fredricks HF, Ossolinski JE, Repeta DJ, Carini P, Armbrust EV, Van Mooy BAS. 2018. Daily changes in phytoplankton lipidomes reveal mechanisms of energy storage in the open ocean. Nature Communications 9: 5179.
doi: 10.1038/s41467-018-07346-z
Link to paper

2017
Durham BP, Dearth SP, Sharma S, Amin SA, Smith CB, Campagna SR, Armbrust EV, Moran MA. 2017. Recognition cascade and metabolite transfer in a marine bacteria-phytoplankton model system. Environmental Microbiology 19:3500-3513.
doi: 10.1111/1462-2920.13834
Link to paper

2015
Amin SA, Hmelo LR, van Tol HM, Durham BP, Carlson LT, Heal KR, Morales RL, Berthiaume CT, Parker MS, Djunaedi B, Ingalls AE, Parsek MR, Moran MA, Armburst EV. 2015. Interaction and signalling between a cosmopolitan phytoplankton and associated bacteria. Nature 522:98-101.
doi: 10.1038/nature14488
Link to paper
Nature News & Views article

Varaljay VA, Robidart J, Preston CM, Gifford SM, Durham BP, Burns AS, Ryan JP, Marin R III, Kiene RP, Zehr JP, Scholin CA, Moran MA. 2015. Single-taxon field measurements of bacterial gene regulation controlling DMSP fate. ISME Journal 9:1677-1686.
doi: 10.1038/ismej.2015.23
Link to paper​

Durham BP, Sharma S, Luo H, Smith CB, Amin SA, Bender SJ, Dearth SP, Van Mooy BAS, Campagna SR, Kujawinski EB, Armbrust EV, Moran MA. 2015. Cryptic carbon and sulfur cycling between surface ocean plankton. Proc Natl Acad Sci USA 112:453-457.
doi: 10.1073/pnas.1413137112
Link to paper
UGA news story

-2014-
Durham BP, Grote J, Whittaker KA, Bender SJ, Luo H, Grim SL, Brown JM, Casey JR, Dron A, Florez-Leiva L, Krupke A, Luria CM, Mine AH, Pather S, Talarmin A, Wear EK, Weber TS, Wilson JM, Church MJ, DeLong EF, Karl DM, Steward GF, Eppley JM, Kyrpides NC, Schuster S, Rappé MS. 2014. Draft genome sequence of marine alphaproteobacterial strain HIMB11, the first cultivated representative of a unique lineage within the Roseobacter clade possessing a remarkably small genome. Standards in Genomic Sciences 9:632-645.
doi: 10.4056/sigs.4998989
​Link to paper

-2013-
Moran MA, Satinsky B, Gifford SM, Luo H, Rivers A, Chan LK, Meng J, Durham BP, Shen C, Varaljay VA, Smith CB, Yager PL, Hopkinson BM. 2013. Sizing up metatranscriptomics. ISME Journal 7:237-243.
doi: 10.1038/ismej.2012.94
Link to paper

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